Associated Genetic Biomarkers

Overview

Gene Location [1]
16q22.1
Variant Type
Substitution - Nonsense
Affected Exon Number
2
Gene
CDH1

CDH1 Q23* is present in 0.15% of AACR GENIE cases, with breast invasive lobular carcinoma, breast invasive ductal carcinoma, invasive breast carcinoma, mixed lobular and ductal breast carcinoma, and breast lobular carcinoma in situ having the greatest prevalence [4].

Top Disease Cases with CDH1 Q23*

References

1. Hart R and Prlic A. Universal Transcript Archive Repository. Version uta_20180821. San Francisco CA: Github;2015. https://github.com/biocommons/uta

2. The UniProt Consortium. UniProt: a worldwide hub of protein knowledge. Nucleic Acids Research. 2019;47:D506-D515.

3. Liu X, Wu C, Li C, and Boerwinkle E. dbNSFP v3.0: A one-stop database of functional predictions and annotations for human nonsynonymous and splice site SNVs. Human Mutation. 2015;37:235-241.

Liu X, Jian X, and Boerwinkle E. dbNSFP: A lightweight database of human nonsynonymous SNPs and their functional predictions. Human Mutation. 2011;32:894-899.

4. The AACR Project GENIE Consortium. AACR Project GENIE: powering precision medicine through an international consortium. Cancer Discovery. 2017;7(8):818-831. Dataset Version 8. This dataset does not represent the totality of the genetic landscape; see paper for more information.

5. All assertions and clinical trial landscape data are curated from primary sources. You can read more about the curation process here.