Associated Genetic Biomarkers

Overview

Gene Location [1]
1q23.1
Pathways
Kinase fusions, Receptor tyrosine kinase/growth factor signaling
Variant Type
Amplification
Gene
NTRK1

NTRK1 Amplification is present in 0.37% of AACR GENIE cases, with lung adenocarcinoma, breast invasive ductal carcinoma, cutaneous melanoma, cancer of unknown primary, and endometrial endometrioid adenocarcinoma having the greatest prevalence [4].

Top Disease Cases with NTRK1 Amplification

Significance of NTRK1 Amplification in Diseases

Malignant Solid Tumor +

Head And Neck Squamous Cell Carcinoma +

Lymphoma +

Hepatocellular Carcinoma +

Melanoma +

Breast Carcinoma +

Pancreatic Carcinoma +

Non-Small Cell Lung Carcinoma +

Acute Myeloid Leukemia +

Adenoid Cystic Carcinoma +

Anaplastic Large Cell Lymphoma +

Cervical Carcinoma +

Esophagogastric Carcinoma +

Hematopoietic And Lymphoid Malignancy +

Malignant Central Nervous System Neoplasm +

Mesothelioma +

Non-Hodgkin Lymphoma +

Ovarian Carcinoma +

Prostate Carcinoma +

Squamous Cell Lung Carcinoma +

Thymic Carcinoma +

Thymoma +

References

1. Hart R and Prlic A. Universal Transcript Archive Repository. Version uta_20180821. San Francisco CA: Github;2015. https://github.com/biocommons/uta

2. The UniProt Consortium. UniProt: a worldwide hub of protein knowledge. Nucleic Acids Research. 2019;47:D506-D515.

3. Liu X, Wu C, Li C, and Boerwinkle E. dbNSFP v3.0: A one-stop database of functional predictions and annotations for human nonsynonymous and splice site SNVs. Human Mutation. 2015;37:235-241.

Liu X, Jian X, and Boerwinkle E. dbNSFP: A lightweight database of human nonsynonymous SNPs and their functional predictions. Human Mutation. 2011;32:894-899.

4. The AACR Project GENIE Consortium. AACR Project GENIE: powering precision medicine through an international consortium. Cancer Discovery. 2017;7(8):818-831. Dataset Version 6. This dataset does not represent the totality of the genetic landscape; see paper for more information.

5. All assertions and clinical trial landscape data are curated from primary sources. You can read more about the curation process here.