Associated Genetic Biomarkers

Overview

Gene Location [1]
22q11.23|22q11
Gene
SMARCB1

SMARCB1 Mutation is present in 0.75% of AACR GENIE cases, with lung adenocarcinoma, colon adenocarcinoma, melanoma, colorectal adenocarcinoma, and bladder urothelial carcinoma having the greatest prevalence [4].

Top Disease Cases with SMARCB1 Mutation

Significance of SMARCB1 Mutation in Diseases

Malignant Solid Tumor +

Prostate Adenocarcinoma +

Prostate Carcinoma +

Non-Hodgkin Lymphoma +

Ovarian Carcinoma +

Breast Carcinoma +

Primary Peritoneal Carcinoma +

Rhabdoid Tumor +

Urothelial Carcinoma +

Cervical Carcinoma +

Epithelioid Sarcoma +

Fallopian Tube Carcinoma +

Colorectal Carcinoma +

Endometrial Carcinoma +

Malignant Central Nervous System Neoplasm +

Non-Small Cell Lung Carcinoma +

Cholangiocarcinoma +

Soft Tissue Sarcoma +

Atypical Teratoid/Rhabdoid Tumor +

Head And Neck Squamous Cell Carcinoma +

Histiocytic And Dendritic Cell Neoplasm +

Rhabdoid Tumor Of The Kidney +

Synovial Sarcoma +

Acute Myeloid Leukemia +

Bladder Carcinoma +

Bladder Urothelial Carcinoma +

Malignant Intestinal Neoplasm +

Kidney Carcinoma +

Esophageal Carcinoma +

Lymphoma +

Malignant Esophagogastric Neoplasm +

Acute Biphenotypic Leukemia +

Acute Leukemia Of Ambiguous Lineage +

Acute Lymphoblastic Leukemia +

Adenocarcinoma Of The Gastroesophageal Junction +

Ampulla Of Vater Carcinoma +

Anal Carcinoma +

Chordoma +

Clear Cell Renal Cell Carcinoma +

Dedifferentiated Chordoma +

Diffuse Large B-Cell Lymphoma +

Extrarenal Rhabdoid Tumor +

Gastric Carcinoma +

Gastrointestinal Stromal Tumor +

Hepatoblastoma +

Hepatocellular Carcinoma +

High Grade Ovarian Serous Adenocarcinoma +

Malignant Gastric Neoplasm +

Malignant Ovarian Epithelial Tumor +

Malignant Small Intestinal Neoplasm +

Mantle Cell Lymphoma +

Mature T-Cell And NK-Cell Non-Hodgkin Lymphoma +

Mesothelioma +

Mixed Phenotype Acute Leukemia +

Pancreatic Adenocarcinoma +

Pancreatic Carcinoma +

Penile Carcinoma +

Retinoblastoma +

Small Cell Lung Carcinoma +

Uveal Melanoma +

Vaginal Carcinoma +

Vulvar Carcinoma +

References

1. Hart R and Prlic A. Universal Transcript Archive Repository. Version uta_20180821. San Francisco CA: Github;2015. https://github.com/biocommons/uta

2. The UniProt Consortium. UniProt: a worldwide hub of protein knowledge. Nucleic Acids Research. 2019;47:D506-D515.

3. Liu X, Wu C, Li C, and Boerwinkle E. dbNSFP v3.0: A one-stop database of functional predictions and annotations for human nonsynonymous and splice site SNVs. Human Mutation. 2015;37:235-241.

Liu X, Jian X, and Boerwinkle E. dbNSFP: A lightweight database of human nonsynonymous SNPs and their functional predictions. Human Mutation. 2011;32:894-899.

4. The AACR Project GENIE Consortium. AACR Project GENIE: powering precision medicine through an international consortium. Cancer Discovery. 2017;7(8):818-831. Dataset Version 6. This dataset does not represent the totality of the genetic landscape; see paper for more information.

5. All assertions and clinical trial landscape data are curated from primary sources. You can read more about the curation process here.