Associated Genetic Biomarkers
Associated Diseases

Overview

Gene Location [1]
21q22.12
Variant Type
Loss
Gene
RUNX1

RUNX1 Loss is present in 0.08% of AACR GENIE cases, with esophageal adenocarcinoma, breast invasive ductal carcinoma, adenocarcinoma of the gastroesophageal junction, pancreatic adenocarcinoma, and colon adenocarcinoma having the greatest prevalence [4].

Top Disease Cases with RUNX1 Loss

Significance of RUNX1 Loss in Diseases

Pancreatic Carcinoma +

Lymphoma +

Melanoma +

Breast Carcinoma +

Malignant Solid Tumor +

Colorectal Carcinoma +

Head And Neck Carcinoma +

Glioblastoma +

Sarcoma +

Non-Small Cell Lung Carcinoma +

Anaplastic Astrocytoma +

Bladder Carcinoma +

Ovarian Carcinoma +

References

1. Hart R and Prlic A. Universal Transcript Archive Repository. Version uta_20180821. San Francisco CA: Github;2015. https://github.com/biocommons/uta

2. The UniProt Consortium. UniProt: a worldwide hub of protein knowledge. Nucleic Acids Research. 2019;47:D506-D515.

3. Liu X, Wu C, Li C, and Boerwinkle E. dbNSFP v3.0: A one-stop database of functional predictions and annotations for human nonsynonymous and splice site SNVs. Human Mutation. 2015;37:235-241.

Liu X, Jian X, and Boerwinkle E. dbNSFP: A lightweight database of human nonsynonymous SNPs and their functional predictions. Human Mutation. 2011;32:894-899.

4. The AACR Project GENIE Consortium. AACR Project GENIE: powering precision medicine through an international consortium. Cancer Discovery. 2017;7(8):818-831. Dataset Version 8. This dataset does not represent the totality of the genetic landscape; see paper for more information.

5. All assertions and clinical trial landscape data are curated from primary sources. You can read more about the curation process here.