Associated Genetic Biomarkers

Overview

Malignant solid tumors most frequently harbor alterations in TP53, KRAS, PIK3CA, APC, and CDKN2A [2].

Most Commonly Altered Genes in Malignant Solid Tumor

TP53 Mutation, TP53 Missense, TP53 c.217-c.1178 Missense, KRAS Mutation, and KRAS Exon 2 Mutation are the most common alterations in malignant solid tumor [2].

Top Alterations in Malignant Solid Tumor

Biomarker-Directed Therapies

Significant Genes in Malignant Solid Tumor

ABL1 +

ABL2 +

ACBD5 +

ACVR1B +

AFAP1L2 +

AFF1 +

AKT1 +

AKT2 +

AKT3 +

ALK +

APC +

APH1A +

APOBEC3A +

APOBEC3B +

APOBEC3C +

APOBEC3D +

APOBEC3G +

APOBEC3H +

ARAF +

ARID1A +

ASXL1 +

ATM +

ATR +

ATRX +

AXL +

BAP1 +

BARD1 +

BCL2 +

BCR +

BLM +

BRAF +

BRCA1 +

BRCA2 +

BRD3 +

BRD4 +

BRIP1 +

BTRC +

C11ORF30 +

CCDC6 +

CCNA1 +

CCNA2 +

CCNB1 +

CCNB2 +

CCNB3 +

CCND1 +

CCND2 +

CCND3 +

CCNE1 +

CCNE2 +

CD274 +

CDH1 +

CDK1 +

CDK12 +

CDK2 +

CDK4 +

CDK6 +

CDKN1A +

CDKN1B +

CDKN2A +

CDKN2B +

CEP43 +

CHD4 +

CHEK1 +

CHEK2 +

CRKL +

CSF1R +

CTNNB1 +

CYLD +

DAXX +

DDIT3 +

DDR2 +

DEK +

DICER1 +

DLL4 +

DNMT3A +

DVL1 +

EGFR +

ELL +

EPCAM +

ERBB2 +

ERBB3 +

ERBB4 +

ERC1 +

ERCC1 +

ERCC2 +

ERCC3 +

ERCC4 +

ERCC5 +

ERCC6 +

ETV6 +

EWSR1 +

EXO1 +

EZH2 +

FAM175A +

FANCA +

FANCB +

FANCC +

FANCD2 +

FANCE +

FANCF +

FANCG +

FANCI +

FANCL +

FANCM +

FBXW7 +

FGF1 +

FGF10 +

FGF11 +

FGF12 +

FGF13 +

FGF14 +

FGF16 +

FGF17 +

FGF18 +

FGF19 +

FGF2 +

FGF20 +

FGF21 +

FGF22 +

FGF23 +

FGF3 +

FGF4 +

FGF5 +

FGF6 +

FGF7 +

FGF8 +

FGF9 +

FGFR1 +

FGFR2 +

FGFR3 +

FGFR4 +

FH +

FIGF +

FLCN +

FLI1 +

FLT1 +

FLT3 +

FLT4 +

FOXO1 +

FZD1 +

FZD10 +

FZD2 +

FZD3 +

FZD4 +

FZD5 +

FZD6 +

FZD7 +

FZD8 +

FZD9 +

GATA3 +

GNA11 +

GNAQ +

GOLGA5 +

HDAC1 +

HDAC2 +

HGF +

HOOK3 +

HRAS +

IDH1 +

IDH2 +

INPP4A +

INPP4B +

INPP5D +

INPPL1 +

IRS2 +

JAG1 +

JAK1 +

JAK2 +

JAK3 +

KDM6A +

KDR +

KEAP1 +

KIAA1217 +

KIF5B +

KIT +

KMT2A +

KMT2C +

KMT2D +

KRAS +

LRP5 +

LRP6 +

MAGI2 +

MAML1 +

MAP2K1 +

MAP2K2 +

MAP2K4 +

MAP3K1 +

MAPK1 +

MAPK3 +

MCL1 +

MCPH1 +

MDM2 +

MDM4 +

MECOM +

MED12 +

MERTK +

MET +

MLF1 +

MLH1 +

MLH3 +

MLLT1 +

MLLT10 +

MLLT3 +

MLLT4 +

MRE11A +

MSH2 +

MSH3 +

MSH6 +

MST1R +

MTAP +

MTOR +

MUTYH +

MYC +

MYCN +

NBN +

NCOA4 +

NCSTN +

NF1 +

NF2 +

NFE2L2 +

NOTCH1 +

NOTCH2 +

NOTCH3 +

NOTCH4 +

NPM1 +

NR4A3 +

NRAS +

NRG1 +

NRIP3 +

NSD1 +

NTRK1 +

NTRK2 +

NTRK3 +

NUP214 +

NUTM1 +

PALB2 +

PARP1 +

PARP2 +

PBX1 +

PCNA +

PDGFB +

PDGFRA +

PDGFRB +

PIK3C2B +

PIK3C2G +

PIK3C3 +

PIK3CA +

PIK3CB +

PIK3CD +

PIK3CG +

PIK3R1 +

PIK3R2 +

PIK3R3 +

PMS1 +

PMS2 +

POLD1 +

POLE +

POLQ +

PPFIBP2 +

PPM1D +

PPP2R1A +

PPP2R2A +

PRKAR1A +

PRKCA +

PRKCB +

PRKCD +

PRKCE +

PRKCG +

PRKCI +

PRKCQ +

PRKCZ +

PRKDC +

PTCH1 +

PTEN +

PTPN11 +

RAD50 +

RAD51 +

RAD51B +

RAD51C +

RAD51D +

RAD54L +

RAF1 +

RASA1 +

RB1 +

RET +

RFC1 +

RFC2 +

RFC3 +

RFC4 +

RFC5 +

RHEB +

RICTOR +

RNF43 +

ROS1 +

RPA1 +

RPA2 +

RPA3 +

RPA4 +

RPN1 +

RPTOR +

RSPO1 +

RUFY1 +

RUNX1 +

SDHA +

SDHAF2 +

SDHB +

SDHC +

SDHD +

SETD2 +

SLX4 +

SMARCA2 +

SMARCA4 +

SMARCB1 +

SMO +

SOS1 +

SOX9 +

SRC +

SS18 +

SSBP1 +

SSX1 +

SSX2 +

SSX2B +

SSX4 +

STAG2 +

STAT1 +

STAT2 +

STAT3 +

STAT4 +

STAT5A +

STAT5B +

STAT6 +

STK11 +

TAF1 +

TBX3 +

TCF3 +

TEK +

TET2 +

TFE3 +

TFEB +

TFG +

TP53 +

TRIM27 +

TSC1 +

TSC2 +

TYRO3 +

UGT1A1 +

VEGFA +

VEGFB +

VEGFC +

VHL +

WNT1 +

WRN +

WT1 +

XPO1 +

XRCC1 +

XRCC2 +

Disease Details

Parent(s)
Solid Neoplasm
Children
Malignant Breast Neoplasm, Sarcoma, Melanoma, Malignant Thyroid Gland Neoplasm, Malignant Peritoneal Neoplasm, Malignant Digestive System Neoplasm, Carcinoma, Malignant Respiratory System Neoplasm, Malignant Soft Tissue Neoplasm, Malignant Giant Cell Neoplasm, Metastatic Malignant Neoplasm, Malignant Fibrohistiocytic Neoplasm, Malignant Mixed Neoplasm, Ewing Sarcoma/Peripheral Primitive Neuroectodermal Tumor, Rhabdoid Tumor, Malignant Mesothelioma, Neuroepithelial Neoplasm, Malignant Head and Neck Neoplasm, Hemangioblastoma, Malignant Retroperitoneal Neoplasm, Blastoma, Malignant Cardiovascular Neoplasm, Malignant Urinary System Neoplasm, Malignant Germ Cell Tumor, Malignant Lipomatous Neoplasm, Malignant Reproductive System Neoplasm, Malignant Skin Neoplasm, Malignant Connective and Soft Tissue Neoplasm, Malignant Endocrine Neoplasm, Malignant Sensory System Neoplasm, Malignant Nervous System Neoplasm, Malignant Solitary Fibrous Tumor, Choriocarcinoma, and Malignant Thoracic Neoplasm

References

1. National Cancer Institute. NCI Thesaurus Version 18.11d. https://ncit.nci.nih.gov/ncitbrowser/ [2018-08-28]. [2018-09-21].

2. The AACR Project GENIE Consortium. AACR Project GENIE: powering precision medicine through an international consortium. Cancer Discovery. 2017;7(8):818-831. Dataset Version 8. This dataset does not represent the totality of the genetic landscape; see paper for more information.

3. All assertions and clinical trial landscape data are curated from primary sources. You can read more about the curation process here.